miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|50298971|gb|CR559519.1|CR559519 CCTTAACATAAATAACTTCTCTCTCTCTCTCGCTGAACAAAGAATCTGAGATGACTTATAAAGCCATATTATTACAGATG
TGTGTTCAAGTGGTTTATATAAACATATATGTCAATAGACCTGGAAAATGCTAAGTCATAAAAACTATACTAGGCAAAAG
TCGTTTTTTTAACCTTATTTTTGTTTTAATAGAAATGCACATCTTTTTTCCTTCTCCTCAAATGTCATATTTTACCTCCA
ACCACTACCTGTGTTTTGAAATACAATGTTTGGCCATCGGGTAAATTTCTTCTTTTAAAAAGCATCGGCCGGGCACAGTG
GCTCACGCCTGTAATCCCAGCACTTTGGGATGCTGAGACGGGTGGATCACCTGAGGTCAGGAATTTGAGATCAGCCTGGC
CAACACGGCAAAACCCCGTCTCTACTAAAAATACAAAAATCACTCAGGTGTGGTGGTGTGCACCTGTAATCCCAGCTACT
CAGGAGTCTGAGGCAGGACAATCGCTTGAACTCGGGAGGTGGATGTTGCAGTGAGTTGAGATCATGCCACTGTACTCCAG
CCTGGGCGACAGAGCAAGACTCGGTCTCAAAAAAAATTATCACAAGTTTTGGATAACTTGTGAATAAAAATTAGGATTTT
TATTCATAATAATTTATATCTATTAAAATAAGAGTTTTTGTTATTCTAAATTAATACTCTCAGAATGAC




Most similar to sp|Q8N2A0|CX062_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
           NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
          Length = 174

 Score =  106 bits (264), Expect = 2e-22
 Identities = 60/94 (63%), Positives = 62/94 (65%)
 Frame = -3

Query: 587 RPSLALSPRLEYSGMISTHCNIHLXXXXXXXXXXX*VAGITGAHHHT*VIFVFLVETGFC 408
           R SL L PRLE SG IS H N+ L            VA  T A HHT +IFVF VETGF 
Sbjct: 72  RWSLTLLPRLECSGTISAHYNLRLLGSSNSPVSASQVAETTEACHHTRLIFVFSVETGFH 131

Query: 407 RVGQADLKFLTSGDPPVSASQSAGITGVSHCARP 306
            VGQA LK LTSGDPP SASQSAGITGVSH ARP
Sbjct: 132 HVGQAGLKLLTSGDPPASASQSAGITGVSHSARP 165